Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFAGDSIKPFIEAGIGVAAFSGTRVGDQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI------------------------------------------------------------------------------------------------ |
| 4K3C Chain:A ((1-532)) | YNISEMRIIGDTQKLDNELNQLLTHFKAGQLFRKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNN-----LNRGYFPTAGSSANISGKLT---------LPGSDNKYYQVGTNFSGYIPLNSEHKWVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRG----FAGG-SIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2641 for 966 contacts (2.7/contact) +
2D Compatibility (PS) -16273 + (NN) -5143 + (LL) 820
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: -21855.0 ( -22.62 by residue)
QMean score : -0.049
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