Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQELLAQP---------DAAYMDEAQQDFFRDLLLRQRQELQARIE-GEFGELRDL--ERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
2RH3 Chain:A ((82-202))
-IQVFLSARPPAPEVSKIYDNLILQYSPSKSLQMILRRALGDFENMLADGSFRAAPKSYPIPHTAFEKSIIVQTSRMFPVSLIEAARNHFDPLG--------------------LETARAFGHKLATAALACFFAREKATNS----
General information:
TITO was launched using:
RESULT:
Template:
2RH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8294 for 723 contacts (11.5/contact) +
2D Compatibility (PS) -11893 + (NN) -4538 + (LL) 1464
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -9923.0 ( -13.72 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_2RH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RH3-query.scw
PDB file :
Tito_Scwrl_2RH3.pdb
: