Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWTALPLLCAGAWLLSAGATAELTVNAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSS--NSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV |
1M6D Chain:A ((1-213)) | -----------------------------------------------------------------------------------------------------------------APPEWDWRSKG-AVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK--MDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINA-FGMQFYRHGISRPLRPLCS--PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124656 for 1834 contacts (-68.0/contact) +
2D Compatibility (PS) -23101 + (NN) -10782 + (LL) 8372
1D Compatibility (HY) -15600 + (ID) 4050
Total energy: -169817.0 ( -92.59 by residue)
QMean score : 0.377
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