Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTSTSVTYDSSLQISQFILMGLPGIHE-----WQHWLSLPLTLLYLLALG------ANLLIIITIQHETVLHEPMY--HLLGILAVVDIGLATTIMPK-------ILAIFWF-DAKAISLPMCFAQIYAIHCFFCIESGIFLCMAVDRYIAIC---------RPLQYPSIVTK--AFVFKATG-FIMLRNGLL-TIPVPILAAQRHYCSRNEIEHCLCSNLGV-----ISLACDDITVNK-----FYQLMLAWVLVGSD--------MALVFSSYAVILHSVL-------------RLNSAEAMSKALST-----CSSHLILILFHTGIIVLSVTHLAEKKIPLIPVFLNV-LHNVIPPALNP-LACALRMHKLRLGFQRLLGLGQDVSK------------------------------------------------------------------------------- |
| 4PXG Chain:A ((26-509)) | TKQAVHNRAKEAVGKSVLELNGGESIKSSVGDAFENWFGVALKATPFKKLKNGKYSSKERLVLNIINYEKVANENFETSSFLSKNNTIELAFYEYIKGTPSDNWIIKEAVLYEMHKNPIDYEIIKQDWEIINQYINEGKAHELSEGLTSYLAPCTKGANASSLRNQPYSDIKAKQRAFSLKSGYMTSILRKYVLGDEKIDSIVKDPFEIKEKSIEDIVFEKFQPYINWSIDKLCEHFSINKGEKGLNYRIASAILNLKGKTTKSKPFPEVEEFEKSSIVVKTVHFNKKNVNKESMSFGAFKFEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIFKGIKFFSMPEEDINGPVKRMW--DDTVKKLKEGV--TLEAVPDKSTKDGWRIKNNFVDKSDDLICHVRPHTNNRDYRGGSNADKLPKKINWINRPDSDDYSDEWMTKQSFWINNDYIKKQVEDLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -340000 for 2138 contacts (-159.0/contact) +
2D Compatibility (PS) -32439 + (NN) 389 + (LL) 420
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -382680.0 ( -178.99 by residue)
QMean score : 0.201
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