Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCALKGFLEENFYTYSVAKGNHSTVYEFILLGLTDNAELQVTLFGIFLVVYLASFMGNFGLIMLIQISPQLHTPMYFFLSHLAFVDFSFTSSVAPNTLVNFLCEVKSITFYACAIQVCCFITFVVCELYLLSIMAYDRYVAICNPLLYVILIPRKCIKLIASTYVYGFTVGLVQTVATSYLSFCDSNVINHFYHDDVPLVALACSDTHVKELMLLIIAGFNTLCSLVIVLISYGFIFFAILRIHSAEGRQKAFSTSASHLTSITIFYGTIIFMYPQPKSSHSLNMDKVASVFNVVVIPTLNPLIYSL--RNQEVKNALKRIIEKLCLAVK |
4E1S Chain:A ((1-242)) | --QHYGTAEVNLQSGNNFDG---SSLDFLLPFYDSEKMLAFGQVGARYI--DSRFTANLGAGQRFFLPAN-------MLGYNVFIDQDFSGD---NTRLGIGGEYWR-------------------DYFKSSVNGYFRMSG-----WHESYNKKDYDERPANGFDIRFNGYL-----PSYPALGAKLIYEQYYGDNVALFN---SDKLQSNPGAATVGVNYTPIPLVTMGIDYRHG---------------------TGNENDLLYSMQFRYQFDKSWSQQIEPQ-------YVNELRTLSGSRYDLVQRNNNI-----------ILEYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201775 for 1898 contacts (-106.3/contact) +
2D Compatibility (PS) -26082 + (NN) -3898 + (LL) 8672
1D Compatibility (HY) -2000 + (ID) 2350
Total energy: -227433.0 ( -119.83 by residue)
QMean score : 0.091
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