Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKSNNSTLFILLG-FSQNK-----NIEVLCFVLFLFCYIAIWMGNLLIMISITCTQ-LIHQPMYFFLN-YLSLSDLCYTSTVTPKLMVDLLAER-KTISYNNCMIQLFTTHFFGGIEIFILTGMAYDRYVAICKPLHYTIIMSRQKCNTIIIVCCTGGFIHSASQFLLTIFVPFCGPNEIDHYFCDVYP--LLKLACSNIHMIGLLVIANSGLIALVTFVVLLLSYVFILYTIRAYSAERRSKALATCSSHVIVVVLFFAPALFI-----------------YIRPVTTFSEDKVFALFYTIIAPMFNPL--------IYTLRNTEMKNAMRKVWCCQ---ILLKRNQLF----------------------------- |
4RDQ Chain:A ((1-366)) | TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFLIFISLYFAISLVYRLILSESQRLMFEKLALYCNSYAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNV--------------DGEDEYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFPSMEHVVRAGLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPPYTAATAEYKRPSFLGSTFDIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250975 for 2017 contacts (-124.4/contact) +
2D Compatibility (PS) -29882 + (NN) 42 + (LL) 1136
1D Compatibility (HY) -17200 + (ID) 2350
Total energy: -299229.0 ( -148.35 by residue)
QMean score : 0.207
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