Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MTRKNYTSLTEFVLLGLADTLE----LQIILFLFFLVIYTLTVLGNLGMILLIRID--------SQLHTPMYFFLANLSFVDVCNSTTITPKMLADLLSEKKTISFAGCFLQ------MYFFISLATTECIL------FGLMAYDRYAAICRPLLYSLI-------MSRTVYLKMAAGAFAAGLLNFMVNTSHVSSLSFCD----SNVIHHFFCDSPPLFKLSCSDTILKESISSILAG------VNIVGTL-------LVILSSYSYVLFSIFSMHSGEGRHRAFSTCASHLTAIILFYATCIYTYL-----------------------------------------------RPSSSYSLNQDKVASVFYTVVIPMLNPLIYSLRSKEVKKALANVISRKRTSSFL---------- |
| 4LZ6 Chain:A ((1-446)) | QKQQSERLGTEAIPKLLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGLVLRYFLTGKSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSDFYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVIQAGVSAMHILFCVTFLIGAQIVAGGLYQSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWAFPIADVLSFILTVVLLYRDRNVFFLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241343 for 2291 contacts (-105.3/contact) +
2D Compatibility (PS) -31685 + (NN) -3554 + (LL) 0
1D Compatibility (HY) -28800 + (ID) 2600
Total energy: -307982.0 ( -134.43 by residue)
QMean score : 0.147
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