Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPENWTQVTSFVLLGFPSSHLIQFLVFLGL--------------MVTYIVTATGKLLIIVLSWIDQRLHIQMYFFLRNFSFLELLLVTVVVPKMLVVILTGDHTISFVSCIIQSYLYFFLGTTDFFLLAVMSLDRYLAICRPLRYETLMNGHVCSQLVLASWLAGFLWVLCPTVLMASLPFCGPNGIDHFFRDSWPLLRLSCGDTHLLKLVAFMLSTLVLLGSLALT-----------SVSYACILATVLRAPTAAERRKAFSTCASHLTVVVIIYGSSIFLYIRMSEAQSKL---------------------LNKGASVLSCIITPLL------NPFIFTLRNDKVQQALREALGWPRLTAVMKLRVTSQRK---------- |
| 4RNZ Chain:A ((1-369)) | MERLVWDKLT---LLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTS-----------PYQDIIKATND-PLLANQLMNAYK---KSVPFKRLVKNDKIAIVYTRDYRVGQAF-GQPTIKMAMVSS--RSNQYYLFSHSNGHYY----DSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASD-GRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242751 for 2118 contacts (-114.6/contact) +
2D Compatibility (PS) -31093 + (NN) 6876 + (LL) 2236
1D Compatibility (HY) -6400 + (ID) 3200
Total energy: -274332.0 ( -129.52 by residue)
QMean score : 0.174
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