Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVVHVSLAALLLLPMAPAMHSDCIFKKEQAMCLEKIQRANELMGFNDSSPGCPGMWDNITCWKPAHVGEMVLVSCPELFRIFNPDQVWETETIGESDFGDSNSLDLSDMGVVSRNCTEDGWSEPFPHYFDACGFDEYESETGDQDYYYLSVKALYTVGYSTSLVTL-TTAMVILCRFRKL---HCTRNFIHMNLFVSFMLRAISVFIKDWIL--YAEQDSNHCFISTVECKAVMVFFHYCVVSNYFWLFIEGLY--LFTLLVETFFPERRYFYWYTIIGWGTPTVCVTVWATLRLYFDDTGCWDMNDSTALWWVIKGPVVGSIMVNFVLFIGIIVILVQKLQSPDMGGNESSIYLRLARSTLLLIPLFGIHYTVFAF-SPENVSKRERLVFELGLG--SF-QGFVVAVLYCFLNGEV--QAEIKRKWRSWKVNRYFAVDFKHRHPSLASSGVNGGTQLSILSKSSSQIRMSGLPADNLAT |
| 4XGC Chain:E ((1-458)) | -------------MEAICSSL------EPLFPCREAAIETLGELIG--DSSETYPS---AIYLFGHSGTGKTALTR--AFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPD---QGDALKVDNMLDFVEQLRRQAATRVED-----QGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACR----------DVPELQLTARKCLSTYLEPVL----DGTSRLWRHIAGPLRSAL---------------------------TQIYMRIESLEL---PYYAKFLLIAAFLASHNAAKQDKRLFSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFN--VRQYLCD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177157 for 2763 contacts (-64.1/contact) +
2D Compatibility (PS) -39507 + (NN) -2872 + (LL) 7004
1D Compatibility (HY) -21200 + (ID) 3200
Total energy: -236932.0 ( -85.75 by residue)
QMean score : 0.170
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