Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MIGQVLSNDDWNRYKKEGFLVTKFGSLIDYVINWARSGSLWPMTFGLACCAVEMMHTASSRYDLDRYGIMFRASPRQADVMIVAGTLTNKM---------AAALRKVYDQMADPKYVVSMGSCANGGGYYHYSYSV--VRGCDRIVPVD----IYVPGCPPTAEALLYGMLCLQNKIKRTQNI--------------------------------------------------------------------------------------------- |
| 1H2A Chain:S ((51-317)) | LMGPRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSLDYHETI-------------------------MAAAGDAAEAALEQAVNSPHGFIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCATFGGVQAAKPNPTGAKGVNDALKHLGVKAINIAGCPPNPYNLVGTIVYYLKNKAAPELDSLNRPTMFFGQTVHEQCPRLPHFDAGEFAPSFESEEARKGWCLYELGCKGPVTMNNCPKIKFNQTNWPVDAGHPCIGCSEPDFWDAMTPFYQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66678 for 994 contacts (-67.1/contact) +
2D Compatibility (PS) -15025 + (NN) -7350 + (LL) 1888
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -89365.0 ( -89.90 by residue)
QMean score : 0.219
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