Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGKKRLIGIVWKYSNKNDQELKFIEQKINLPNIRLKLIAFAEWVAQYNVISIGMLAKVIMGGVLKVNHLDKLVHVEQEQEVSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQLIKNYSSTPATPNAARTLSFQCPDTQLYKHCNLGPPVGYHPSTLILGSSFPRNLIKNVHFNVRAATPIPSLQTKFLDSSVSYLHDIFMFKAKPTIIFNTLSSPSAGMTPKYVETASNKGSIQVLILLPEIVLTSQLVNRIRSQTSR--NLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSALF-----LPYKNLKLIIVDEEHDSSFKQEQ---------GTIYNARDMAI---------ILAKIENIPIILSSATPLLETIYHVKNGNYNYVKLAKRFGGAELPLIKVVDTRNNKQWISNELFEGIKQTIEKKQQVMLFLNRRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLFLYGIGIERLLEETVKLIPNAKTAIISSDQK--SVSNVIDLVLKEELNIIIGTQ----IIAKGHNFPK-LTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNE----KGMVIVQTNHPESSVIKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCLSKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKKLKYWIKNCNLSPNIIVTIDVDPISFF |
| 3OIY Chain:A ((62-363)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKGKKSALVFPTVTLVKQTLERLQKLADEKVKIFGFYSSMKKEEKEKFEKSFEEDDYHILVFSTQFVSKNREKLSQKRFDFVFVDDVDAVLKASRNIDTLLMMVGIPEEIIRKAFSTIKQGKIYERPKNLKPGILVVSSATAKPRGIRPLLFRDLLNFTVGRLV--SVARNITHVRISSR----SKEKLVELLEIF--RDGILIFAQTEEE-------------------------------------------------------------GKELYEYLKRF--K-----FNVGETWSEFEKNFEDFKVGKINILIGVQAYYGKLTRGVDLPERIKYVIFWGTPSGPD----------VYTYIQASGRSSRILNGVLVKGVSVIFEEDEEIFESLKTRLLLIAEEEIIEEAEANWKELVHEVEESRRRSER------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91060 for 1840 contacts (-49.5/contact) +
2D Compatibility (PS) -29150 + (NN) -11621 + (LL) 32704
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: -110627.0 ( -60.12 by residue)
QMean score : 0.342
|
|
|