Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNF----------VNTAKKKKLTIKTAKAGVKL--------------PVKGVNAQFVGPVKTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQG------SKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK |
| 2P4Z Chain:A ((10-284)) | -----HGSVEVQVLIENVVFARNFVAE--------------HGLSLLLKK-GNKEIVVDTGQSENFIKNCGLMG-IDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAMRKGGQFEEIGFDLSFYEKYKNNFVLIDKDAEIEEGFYVITNTDITYDNEFTTKNFFVEKEGKRIPDKFLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCT------------GIDEYGFLKSVLKDKISYLTTSSSIVV-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2P4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39562 for 2016 contacts (-19.6/contact) +
2D Compatibility (PS) -26262 + (NN) -8727 + (LL) 1672
1D Compatibility (HY) -8800 + (ID) 1650
Total energy: -83329.0 ( -41.33 by residue)
QMean score : 0.316
|
|
|