Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MYVEQLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTIDEIQ--HCVENTLMKSTYPDVARAYIEYRHDRDHERENITDMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHLKGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIANVASSQYGGCSVDRIDEVLSVYARL--NFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDAMQSLEYEINTLYTSNGQTPFVTLGFGLGEDWFAREIQKAILKVRIGGVGKDKHTAIFPKLVFSIRRGTNLNAEDPNYDIKQLALECSSKRMYPDVLNYDSLVRLTGDFKVPMGCRSFLPAWENEN-GEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLFRLNRVRQARPENAPILYKYGAFGKRLQDGEDVDQLFNKERSTISIGYIGLYEAATVFYGGEWEGDKEAKNFT--LDIV---KELKAYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKYGVIKDITDKDYYQNSFH-YDVRKKIDFEKDYPEFC-SGGFIHYCEYPKMVHNTKALEAVWDYSYDRVAYLGTNTPI---DKCYECDFEGEFVPTEEGFKCPSCGNTDPEKADVVKRTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE- |
| 2QYU Chain:A ((8-627)) | ATSSPSSPADWAKKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKILPPSFMERDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSN---------SDMN---EVFLQYSITTQQQPSFIDTTLKNT------------------LIRH--KANLSGVI-LNEPDNSSPPSVSGG---------GNFIRLGDIWLQMPLLW---TENAVDGFLN--HEHNNGKS------ILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLA-----HPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPAPDTYYQQRILPVLLDSFDRNSAAMTTHSGL-FNQVILHCMTGV----DCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGN--YDGSPDWT--TRAADNFLLLSSQDSDTAMML---STDTLLTML--------NPTPDTA-----WDNF-YLLRAGENV--------STAQISPVELFRHDFPVFLAAFNQQATQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLP--EGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYSSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTEWSDRFHGLHGAFTCTS-----------------VVADSMQRHARKY----FPSVLSSILPLAWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73849 for 4711 contacts (-15.7/contact) +
2D Compatibility (PS) -60553 + (NN) -3599 + (LL) 8696
1D Compatibility (HY) -12400 + (ID) 5200
Total energy: -146905.0 ( -31.18 by residue)
QMean score : 0.252
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