Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANDWKKSARGLALMTLEEVFDKGAYSNIALNKSLKKSRLSDKDRALVTEIVYGTVARKITLEWYLSHFIVDRDKLELWVYHLLLLSLYQLLYLDNIPDHAIVNDAVTIAKNRGNKKGAEKLINAVLRRVSSETLPEIASIKRQNKRYSVAYSMPVWLVKKLIDQYGETRALAIMESLFERNKASLRVTDLSQKQTIKETLNVRDSHIAETALVADSGNFASTSFFQDGL--ITIQDESSQLVAPTLKVSGNDQVLDACSAPGGKTSHIASYLTTGAVTALDLYDHKLELVMENAKRLGLSDK-----IKTKKLDASKAHEYFLEDTFDKILVDAPCSG--IGLIRRKPDIKYNKANQDFEALQEIQLSILSSVCQTLRKGGIITYSTCTIFEEENFQVIEKFLENHPNFEQVELSHTQEDIVKRGC--------------ISISPEQYHTDGFFIGQVKRIL |
| 4FP9 Chain:A ((15-360)) | -------PAVRLALQNFDMTYSVQF-----------------------------------------------GDLWPSIRVSLLSEQKYGALVNNFAAWDHVSAKLEQ--------LSAKDFVNEAISHWELQPSPASWACSP---------NLRCFTFDR-----------------------------------------------------GDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL-EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSCQVGELVIPNLMANFGPMYFCKMRRLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124423 for 2622 contacts (-47.5/contact) +
2D Compatibility (PS) -33552 + (NN) -13469 + (LL) 10396
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -176548.0 ( -67.33 by residue)
QMean score : 0.361
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