Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKLPNEFIEKYQTILKDEAEAFFDSFEQKP-----ISAYRTNPLKEKQL------DFPNAIPSTPWGHYGKISGKSIEHTTGLV---------------------YSQEPAAQIVAQIA-EPQEGMKVLDLAAAPGGKTTHLLSYLNNTGLLVSNEISNKRSKILVENVERF------GARNVIVTNESSQRLAKCFNSFFDLIVFDGPCSG--EGMFRKDPQAIQYWHKDYPTECAQLQRDILKEAIKMLAHGGILVYSTCTWSPEENEEVVNWLLQEYDYLELVDIPKLNGMVEGINVPQVARMYPHHFQGEGQFVAKLRDTRSKEAQKIKPKAQKINKMQLQLWQQFAQDHLKIDLNGVLDVFGDQLYLLPNGLPDLSKLKIARNGLHLGTFKKNRFEPSFALGMALSEHDLVQSIEIDIEQFEVYVSGNVVKLDKTVPNGWYQILVKGNGLGFAKVTNNTLKNYYPKGLRFQT |
| 4FP9 Chain:A ((15-360)) | PAVRLALQNFDMTYSVQFGDLWPSIRVSLLSEQKYGALVNNFAAWDHVSAKLEQLSAKDFVNEAISHWELQPSPASWACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQ-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDL-------THFRRVFMDTFC---------------------------------------------------------------------------------------FFSSCQVGELV------------------------------IPNLMANF----GPMYFCKMRRLT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110461 for 2436 contacts (-45.3/contact) +
2D Compatibility (PS) -30927 + (NN) -7134 + (LL) 9812
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -153260.0 ( -62.91 by residue)
QMean score : 0.365
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