Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAE------HPFGPGPVKALEFFLEMAERDGYETK--NVDNYAGHFTFGQGEEELGIFGHLDVVPAGSGWDTDPYEPVIKDNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAH-GSTPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDETNDDNTIALNFRYPQGTDAKTIQTKLEKLNGVE---------KVTLSDHEHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVI-GGGTFGRLLERGVAYGAMF-PGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK------- |
| 1R3N Chain:A ((17-454)) | GTLNLPAAAPLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKIGNMFAVYPGKNGGKPTATGSHLDTQPEA--------------------GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLS---LEEAYGLMSVGEDKPES--------VYDSLKNIGYIGDTPASYKENEIDAHFELHIEQ----GPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRHNGLFTCGIIDAKPYSV-----------------------NIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETLQVSP-AVNFHEVCIECVSRSAFAQFKKDQVRQIWSGAGHDSCQTAPHVPTSMIFIPSKDGLSHNYYEYSSPEEIENGFKVLLQAIINYDNYRVIRGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44026 for 3520 contacts (-12.5/contact) +
2D Compatibility (PS) -44577 + (NN) -20087 + (LL) 2332
1D Compatibility (HY) 1600 + (ID) 3350
Total energy: -108108.0 ( -30.71 by residue)
QMean score : 0.356
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