Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGS-RDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKN-KMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI
3H2Y Chain:A ((56-368))----------------------------------------------------------DDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGKDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFP----DLIDIPLDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAFTCHFSNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELENMPELVKYEFNIREPKTDVVFSGLGWVTVNEP---GAKIVAHVPKGVSVSLRKSLI


General information:
TITO was launched using:
RESULT:

Template: 3H2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -223651 for 2532 contacts (-88.3/contact) +
2D Compatibility (PS) -33568 + (NN) -10095 + (LL) 4488
1D Compatibility (HY) -36000 + (ID) 8650
Total energy: -307476.0 ( -121.44 by residue)
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_3H2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2Y-query.scw
PDB file : Tito_Scwrl_3H2Y.pdb: