Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQLNSSFMIGKVEIPHRTVLAPMAGITNSAFRTIAKE-------FGAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGGDAEGLKRAADFIQSNTKADIVDINMGCPVNKVVKNEAGAKWLRDPEKIYHIVKEVTSVL--DIPLTVKMRTGWSDSSNAIENALAAESAGVSALAMHGRTREQMYTGT-CDHETLGKVAKAVTSIPFIANGDIRTVHDAKFMIEEIGADAIMVGRGARSNPYIFTQINHFFETGEILPDLPFEKMLDVAEDHLTRLVNLKGETIAVREFRGLAPHYLRGKSGAAKIRGAVSRAETLAEVQELFAGLR---- |
4BFA Chain:A ((22-338)) | --------------ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVEL-GSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLN-IPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKY----NE--PRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143630 for 2612 contacts (-55.0/contact) +
2D Compatibility (PS) -32722 + (NN) -9489 + (LL) 1976
1D Compatibility (HY) -16400 + (ID) 3800
Total energy: -204065.0 ( -78.13 by residue)
QMean score : 0.502
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