Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAYQEHQTLRGIQQEIKSEIEIAANVQQTLLGTKVPQEEALDIGAISV--PAKQMSGDYYHFVKDKESINIAIADVIGKGIPAALCMSMIKYAMDSLPETGIHPSQVLKNLNRVVEQNVDASMFITMFYANYNMDKHQFTYASAGHEPGFYYSQKDNTFYDLEAKGLVLGISQDYDYKQFDQHLEKGDMIVLFSDGVTECRTENGFLERPDLQKLIEEHMCSSAQEMVKNIYDSLLKLQDFQLHDDFTLIVLRRKV
3ZT9 Chain:A ((3-193))------------------------------------------------------------------------------------------------------------------------KLEVGIYTRAREGEIACGDACLVKRVEGVIFLAVGDGIGHGPEAARAAEIAIASMESSMN--TGLVNIFQLCHRELR----GTRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKG-IITPL-ATPGILGYNYPHQLLIAKGSYQEGDLFLIHSDGIQEGAVPL------A---LLANY-RLTAEELVRLIGEKY-----GRRDDDVAVIVAR---


General information:
TITO was launched using:
RESULT:

Template: 3ZT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1145 -167585 -146.36 -886.69
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -146.36
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_3ZT9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZT9-query.scw
PDB file : Tito_Scwrl_3ZT9.pdb: