Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENIIEINYNQTGKSKKTNEYGMREMQARAFEKR-NSQYLLVKAPPASGKSRALMFIGLDKLINQGLRKVIVAVPERSIGSSFKNTDLKSYGFFENWKVDPRNNLTVGGDNS--KVKSFVRFMESDDQVLICTHSTLRFAFEKIDDKAFDNCLLAIDEFHHVSADVN--SRLGELLRSIIH-NSSAHIVAMTGSYFRGDSVPILLPEDEELFDKVTYSYYEQLDGYEYLKGFGIGYHFYQ-GQYTSAINEVL--DTNKKTIVHIPNVNSGESTKDKYDEVGKILDMIGEVEYQDDDTGIIYVKRHSDGKTLKIADLVDD--QVGRENVVAYLRNIEALDDLDIIIALGMAKEGFDWPFCEHTLTVGYRGSLTEIVQIIGRCTRDSYNKTYAQFTNLIAMPDAKDEVVTYTVNTMLKAISASLLMEQVLTPDFKFKRRRNESEKSSTTGELFVKGLKEPSTENVKKIIENDINDLKAKIMQDSQVQKTFSGEVDPKVLNKVLIPKVIQKVYPNLSDEEIEEVRQHVVLDTVMKGAKSEVVGSKEFIRMADKFINIEDLDINLIDSINPFQKAFEVLSKELNSPVLKLIQETIDAKRINFDEDELVFIWPKV
1OYW Chain:A ((25-332))---------------------QFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL-----NGLTVVVSPLISLMKDQVD-QLQANGVAA--------ACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDP-LIQISSF---------DRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKV-------EDTAARLQSKG-------IS-A--------------AAYHAGLENNVRADVQEKFQR----DDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1463 -170511 -116.55 -574.11
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -116.55
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_1OYW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OYW-query.scw
PDB file : Tito_Scwrl_1OYW.pdb: