Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMFEKPHGMRDTLPGLYETKKKVRRSLTDLIDKWGYQFMETPTLEFYDTVGVQSAIEEQQLFKLLDQDGKTLVLRPDMTGPIARVAASKLLKHGHPLRVGYAANVFRAQEREGGRPAEFEQVGVELIGDGTTSADAEVIALVVGALKNAGLASFKIAIGHAGIADALFVEVLGNVERADVLRRFLYEKNYVGYREH-VKSLPLSSIDKSRLLELLELRGGIEVCGRAEEIVDSAQGKSVVDELKALWDILEDYGCTENVRLDLNMVSHMSYYTGILFEVYAENVGFVIGSGGRYNKLLGHFDSPAPATGFGLRIDRLIEALHMKDEPC-EIDAVIFSKEQRAQ-AIAYANEERMKGNKVVLQDLSGIENIDQMTKSFANVTYFIGARKEEQNG
3OD1 Chain:A ((8-373))-FMFEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQ---GKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSEFKVAIGHVGYVNALLMDVVGNEQRADRLRRFLYEKNYVGYREHVKSL-NLSTIDKSRLMNLLSLRGGRAAIEEARGLIQTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGVPLCSGGRYDELLSKFHRPAQATGFGVRIDLLVEALN-----GHEQTCILF-SNERRFEAIELARKKRANGEAVVLQDLAGV--------------------------


General information:
TITO was launched using:
RESULT:

Template: 3OD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1694 -98353 -58.06 -277.83
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.88

3D Compatibility (PKB) : -58.06
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_3OD1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OD1-query.scw
PDB file : Tito_Scwrl_3OD1.pdb: