Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPVNVISVAVVASDPLTRDGALARLSSHRELDVRA-----------WQAGCETSVLLVLATTITAPLLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI
3KLO Chain:A ((4-220))
--DENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDA-KEVIINCPQDIEHKLLFKWNNLAGVFYID-DDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRA-GNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGI
General information:
TITO was launched using:
RESULT:
Template:
3KLO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126455 for 1498 contacts (-84.4/contact) +
2D Compatibility (PS) -21427 + (NN) -5313 + (LL) 384
1D Compatibility (HY) -11600 + (ID) 1800
Total energy: -166211.0 ( -110.96 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3KLO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KLO-query.scw
PDB file :
Tito_Scwrl_3KLO.pdb
: