Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTLTALGMPALRSRTNGIADPRVVPTTGP--LVDTFGRVAN----DLRVSLTDRCNLRCSYCMPERGLRWLPGEQLLRPDELARLIHIAVTRLGVTSVRFTGG-----EPLLAHHLDEVVAATARLRPRPEISLTTNGVGLARRAGALAEAGLDRVNVSLDSID-RAHF-AA---------ITRRDRLAHVLAGL----------AAAKAAGLTPVKV-NAVLDPTTGRED--VVDLLRFCLERGYQLRVI-EQMPLDAGHSWRRNIALSADD-----VLAALR----------PHFRLRPDPAPRGSAPAELWLVDAGPNTPRGRFGVIASVSHAFCSTCDRTRLTADGQIRSCLFSTEETDLRRLLR-GGADDDAIE-AAWRAAMWSKPAGHGINAPDFIQPDRPMSAIGG- |
| 4QHW Chain:A ((2-401)) | QPQQVVVGVSGNGYVTRQQDGARITQRGVTHWTNPKSIVSIYFYLHQPTTADLSLYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRGPSVHLGYALPEGD-TEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGNEGSGGQSYLKYPWKAGNTYKFLMQIRP-DGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTH-------DATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGT---KFYCKPTGK--------EPEIDWEALKQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100423 for 2531 contacts (-39.7/contact) +
2D Compatibility (PS) -34652 + (NN) 4024 + (LL) 1180
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -141771.0 ( -56.01 by residue)
QMean score : 0.169
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