Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MAPASTSSTGGHALATLLGNHGVEV--------VVADSIADVEAAARPDSLLLVAQTQYLVDNALLDRLAKAPGDLLLVAPTSRTRTALTPQLRIAAASPFNSQP-----------------NCTLREANRAGSVQWGPS-------------------------DTYQATGDLVLTSCYGGALVRFRAEGRTITVVGSSNFMTNGGLLPAGNAALAMNLAGNRPRLVWYAPDHIEGEMS--SPSSLSDLIPE--NVHWTIWQLWLVVLLVALWKGRRIGPLVAEELPVVIRASETVEGRGRLYR---------SRRARDRAADALRTATLQRLRP--------------------RLGV-------------GAGAPAPAVVTTIAQRSKADPPFVAYHLFG--PAPATDNDLLQLARALDDIERQVTHS |
| 1ORD Chain:A ((108-569)) | PPFFKSLKEYVSRGLIQFDCPGHQGGQYYRKHPAGREFYDFFGETVFRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVS-NGDLVLFDRNNH-KSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIEED |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131514 for 2364 contacts (-55.6/contact) +
2D Compatibility (PS) -34463 + (NN) -4803 + (LL) 196
1D Compatibility (HY) -3600 + (ID) 2100
Total energy: -176284.0 ( -74.57 by residue)
QMean score : 0.338
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