Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDLQRLAEFPLVLPLAGTTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH-
1I6A Chain:A ((87-298))
-------------------------------------------------------------ETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVI--LALVKESEAFIEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADED-THFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFD
General information:
TITO was launched using:
RESULT:
Template:
1I6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165491 for 1645 contacts (-100.6/contact) +
2D Compatibility (PS) -22048 + (NN) -4647 + (LL) 4368
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -199318.0 ( -121.17 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1I6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6A-query.scw
PDB file :
Tito_Scwrl_1I6A.pdb
: