Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFHG-----EDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLGDSNRLQLGNDQHLLFRPHEVSLSRSAVAEHRAAEVRDIRPLGAITRVTLKVDGQDELIEAEVVKDHDSLAGLARGETLYFKPKAFQPVANL
3C4J Chain:B ((25-259))--IDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREE-VGMVFQRFNLFPHMTVLNNITLA-PMKVR-KWPREKA-EAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160913 for 1890 contacts (-85.1/contact) +
2D Compatibility (PS) -25047 + (NN) -9907 + (LL) 6360
1D Compatibility (HY) -23200 + (ID) 5000
Total energy: -217707.0 ( -115.19 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3C4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C4J-query.scw
PDB file : Tito_Scwrl_3C4J.pdb: