Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDMHDDIPAGSRCGYVAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTE-GEVQAVYVDTPGLHKSGE--KALNRYMNRTASAALKDVDVVIFVVD-RTRWTEEDQMVLER-VQYVSCPVLIAVNKTDRIEEKADLLPHLEWLT-QQLPKAEVVPISAQHGTNLDVLEKLVAERLPESEHFFPEDQITDRSSRFLAAELVREKIMRQLGAELPYQITVEIEEFKQEG---RILHIHALILVEREGQKKIIIGDKGERIKSIGQNARKDMEVLFDSKVMLNLWVKVKGGWSDDERALRSLGYGDL |
| 3IEV Chain:A ((7-307)) | ----------HMKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGH-SMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166396 for 2368 contacts (-70.3/contact) +
2D Compatibility (PS) -32625 + (NN) -16346 + (LL) 516
1D Compatibility (HY) -28800 + (ID) 6150
Total energy: -249801.0 ( -105.49 by residue)
QMean score : 0.599
|
|
|