Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM
2BOV Chain:A ((12-182))
LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKMED-------------------
General information:
TITO was launched using:
RESULT:
Template:
2BOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91529 for 1356 contacts (-67.5/contact) +
2D Compatibility (PS) -19014 + (NN) -10664 + (LL) 492
1D Compatibility (HY) -18000 + (ID) 4500
Total energy: -143215.0 ( -105.62 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_2BOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BOV-query.scw
PDB file :
Tito_Scwrl_2BOV.pdb
: