Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKYLLPVLVLCLGYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMAFAERFVVEAGKLLGGLDMLILNHITQTTMSLFHDDIHSVRRSMEVNFLSYVVLSTAALPMLKQSNGSIAIISSMAGKMTQPLIASYSASKFALDGFFSTIRKEHLMTKVNVSITLCVLGFIDTETALKETSGIILSQAAPKEECALEIIKGTVLRKDEVYYDKSSWTPLLLGNPGRRIMEFLSLRSYNRDLFVSN
3BZU Chain:D ((20-275))
---------------------EFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR--ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYS-----------
General information:
TITO was launched using:
RESULT:
Template:
3BZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -182591 for 2151 contacts (-84.9/contact) +
2D Compatibility (PS) -27312 + (NN) -7826 + (LL) 2336
1D Compatibility (HY) -35200 + (ID) 10000
Total energy: -260593.0 ( -121.15 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_3BZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BZU-query.scw
PDB file :
Tito_Scwrl_3BZU.pdb
: