Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLVCVLLVCSSAVAQLHKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQRNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID-NKGIDSDASY---PY-------KAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT-QNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNK-GNHCGIASFPSYPEI |
| 1MEM Chain:A ((1-215)) | ------------------------------------------------------------------------------------------------------------------APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--END-GCGGGYMTNAFQYVQKN-RGIDSE---DAYPYVGQEESCMYN-PT------GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN-NACGIANLASFPKM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132399 for 1734 contacts (-76.4/contact) +
2D Compatibility (PS) -22077 + (NN) -10963 + (LL) 9040
1D Compatibility (HY) -18400 + (ID) 6000
Total energy: -180799.0 ( -104.27 by residue)
QMean score : 0.500
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