Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1RA3 Chain:A ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1RA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121280 for 1188 contacts (-102.1/contact) +
2D Compatibility (PS) -17456 + (NN) -9969 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -179005.0 ( -150.68 by residue)
QMean score : 0.806
(partial model without unconserved sides chains):
PDB file :
Tito_1RA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RA3-query.scw
PDB file :
Tito_Scwrl_1RA3.pdb
: