Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD---MHI--QGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
| 1KEQ Chain:A ((4-241)) | ---------------------------------------------------GTRQSPINIQWKDSVYDPQLAPLRVSYDAAS---CRYLWNTGYAFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDE-WGSEHAVDGHTYPAELHLVHWNSTKYENCKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLMPAC-RDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSMFRTLLFSGRGEEED--VMVNNYRPLQPLRDRKLRSSFRL--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115594 for 1923 contacts (-60.1/contact) +
2D Compatibility (PS) -24909 + (NN) -12251 + (LL) 7636
1D Compatibility (HY) -16400 + (ID) 3950
Total energy: -165468.0 ( -86.05 by residue)
QMean score : 0.409
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