Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASPDWGYDDKNGPEQWSKLYP---IANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQPLKGRTVRASF
4G7A Chain:A ((25-248))
---EWSYEGEKGPEHWAQLKPEFFWCKLKNQSPINIDKK-YKVKANLPKLNLYYKTAKESEVVNNGHTIQINIKED---NTLNYLG--EKYQLKQFHFHT------PSEHTIEKKSYPLEIHFVHKTE------------DGKILVVGVMAKLGKTNKELDKILNVAPAE--EGEKILDKNLNLNNLIPKDKRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMVN----------PNNRPVQEINSRWIIEGF
General information:
TITO was launched using:
RESULT:
Template:
4G7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78354 for 1723 contacts (-45.5/contact) +
2D Compatibility (PS) -23763 + (NN) -15230 + (LL) 1648
1D Compatibility (HY) -17200 + (ID) 3950
Total energy: -136849.0 ( -79.42 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4G7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G7A-query.scw
PDB file :
Tito_Scwrl_4G7A.pdb
: