Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
3G76 Chain:E ((13-107))
-------------STNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHS---------
General information:
TITO was launched using:
RESULT:
Template:
3G76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26601 for 675 contacts (-39.4/contact) +
2D Compatibility (PS) -10302 + (NN) -6051 + (LL) 1252
1D Compatibility (HY) -12400 + (ID) 4750
Total energy: -58852.0 ( -87.19 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_3G76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G76-query.scw
PDB file :
Tito_Scwrl_3G76.pdb
: