Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
3IPY Chain:B ((1-241))-------------------RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCN----------------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL


General information:
TITO was launched using:
RESULT:

Template: 3IPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110013 for 1742 contacts (-63.2/contact) +
2D Compatibility (PS) -23944 + (NN) -7897 + (LL) 1560
1D Compatibility (HY) -34000 + (ID) 10650
Total energy: -184944.0 ( -106.17 by residue)
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_3IPY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IPY-query.scw
PDB file : Tito_Scwrl_3IPY.pdb: