Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MAEEEAPKKSRAAGGGASWELCAGALSARLAEEGSGDAGGRRRPPVD-----PRRLAR-----QLLLLLWLLEAPLLLGVRAQAAGQGPGQGPGPGQQPPPPPQQQQSGQQYNGERGISVPDHGYCQPISIPLCTDIAYNQTIM----PNLLGHTNQEDAG----------------LEVHQFYPLVKVQCSA-----ELKFFLCSMY---APVC---------------------TVLEQALPP----CRSLCERARQGCE-ALMNKFGFQWPDTLKCEKFPV------HGAGELC--VGQNTSDKGTPTPSLLPEF-WTSNPQHGGGGHRGGFPGGAGASERGKFSCPRA-------------------LKVPSYLNYHFLGEKDCGAPCEPTKVYGLMYFGPEELRFSRTWIGIWSVLCCASTLFTVLTYLVDMRRFS--YPERPIIFLSGCYTAVAVAYIAGFLLEDRVVCNDKFAEDGARTVAQGTKKE----GCTILFMM-----------LYFFSMASSIW-------WVILSLTWFLAAG--MKWGHEAIEANSQYFHLAAWAVPAIKTITILALGQVDGDVLSGVCFVG--------LNNVDALRGFVLAPLFV--------YLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRI--------------------------GVFSVLYTVPATIVIACYFYEQAFRDQWERS------------WVAQSCKSYAIPCPHLQAGGGAPPHPPMSPDFTVFMI---KYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSKQGETTV---------------------------------------------------- |
| 4TUU Chain:A ((5-944)) | NREEKILNREIGFAIGMPVCEFDMVKDPEVQDFRRN----ILNVCKEAVDLRDLNSPHSRAMYVYPPNVESSPELPKHIYNKLDKGQIIVVIWVIVSPNNDKQKYTLKINHDCV---PEQVIAEAIRKKTRSMLYQGKYILKVCGCDEYFLEKYPLSQYKYIRSCIMLGRMPNLMLMAKESLYSQLPMDCFTMPSYSRKSLWVINSALRIKILCATYVNVNDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLELEFDWFSSVVK--------FPDMSVIEEHANWSVSREAGFSYSHAGLSNRLARDNELRENDKEQLKAISTRDPLSE-ITEQEKDFLWSHRHYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYL--TDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRFGLLLESYCRACGMYLKHLNRQVEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDRVPFVLTQDFLIVISTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYFMKQMNDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235763 for 4248 contacts (-55.5/contact) +
2D Compatibility (PS) -65270 + (NN) 1992 + (LL) -1440
1D Compatibility (HY) -32800 + (ID) 5850
Total energy: -339131.0 ( -79.83 by residue)
QMean score : 0.113
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