Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTSPILQLLLRLSLCGLLLQRAETGSKGQTAGELYQRWERYRRECQETLAAAEPPSGLACNGSFDMYVCWDYAAPNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWGLWRDHTQCENPEKNEAFLDQRLILERLQVMYTVGYSLSLATLLLALLIL----SLFRRLHCTRNYIHINLFTSFMLRAAAILSRDRLLPRPGPYL-GDQALALWNQALAACRTAQIVTQYCVGANYTWLLVEGVYLHSLLVLVGGSEEGHFRYYLLLGWGAPALFVIPWVIVRYLYENTQCWERNEVKAIWWIIRTPILMTILINFLIFIRILGILLSKLRTRQMRCRDYRLRLARSTLTLVPLLGVHEVVFAPVTEEQARGALRFAKLGFEIFLSSFQGFLVSVLYCFINKEVQSEIRRGWHHCRLRRSLGEEQRQLPERAFRALPSGSGPGEVPTSRGLSSGTLPGPGNEASRELESYC |
3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEI---EDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRD----------------PANKAVAYSIIASTLAI------------MEYEEDAMDFFN-RAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGA-ETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHV-------NQRAAIVEKKIELAKTVYDVG---LPQIRAALLKGKNHYALAIIKKK-----YSGVM-RLIGELEVALWMKRV--------NNMEYLDVVDKAFECCESPRF-TDVNVQHIARLLTEL----------------GNLRRALKFAK---EIQ----------------NIHKRSEALKAIALELVRRKKFEEVKKIIES-------------IPD---------PKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178185 for 2812 contacts (-63.4/contact) +
2D Compatibility (PS) -36332 + (NN) -6332 + (LL) 7208
1D Compatibility (HY) -10000 + (ID) 3700
Total energy: -227341.0 ( -80.85 by residue)
QMean score : 0.439
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