Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSGENVTRVGTFILVGFPTAPGLQYLLFLLFLLTYL----FVLVENLAIILTVWSSTSLHRPMYYFLSSMSFLEIWYVSDITPKMLEGFLLQQKRISFVGCMTQLYFFS-------SLVCTECVLLASMAYDRYVAICHPLR----YHVLVTPGLCLQLVGFSFVSGFTISMIKVCFISSVTFCGSNVLNHFFCDISPILKLACTDFSTAELVDFILAFIILVFPLLATMLSYAHITLAVLRIPSATGCWRAFFTCASHLTVVTVFYTALLFMYVRPQAIDSRSSNKLISVLYTVITPILNPLIYCLRNKEFKNALKKAFGLTSCAVEGRLSSLLELHL-QIHSQPL- |
| 4R1D Chain:B ((1-301)) | MDKTGWITHCFGRFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDF----------GNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCI---DHAYIAGD--SFQVERFGVGVTFPEH-----------PGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPG--EEYLVAGSDKG-----QRGYTFMWEVQGKEESLTEPNLTAGLAVLE-----------RSNENGKPPPPAF-----KSDKEALELWDTIVDSIRVRPTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293053 for 2094 contacts (-139.9/contact) +
2D Compatibility (PS) -29408 + (NN) -1110 + (LL) 4324
1D Compatibility (HY) 800 + (ID) 2600
Total energy: -321047.0 ( -153.32 by residue)
QMean score : 0.230
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