Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWGRLLLWPLVLGFSLSGGTQTPSVYDESGSTGGGDDSTPSILPAPRGYPGQVCANDSDTLELPDSSRALLLGWVPTRLVPALYGLVLVVGLPANGLALWVLAT-QAPRLPSTMLLMNLAAADLLLALALPPRIAYHLRGQRWPFGEAACRLATAALYGHMYGSVLLLAAVSLDRYLALVHPLRARALRGRRLALGLCMAAWLMAAALALPLTLQRQTFRLARSDRVLCHDALPLDAQASHWQPAFTCLALLGCFLPLLAMLLCYGATLHTL--AASGRRYGHALRLTAVVLASAVAFFVPSNLLLLLHYSDPSPSAWGNL-----YGAYVPSLALSTLNSCVDPFIYYYVSAEFRDKVRAGLFQ-RSPGDTVASKASAEGGSRGMGTHSSLLQ |
| 1U19 Chain:A ((4-349)) | MNGTEGP-----NFYVPFSNKTGVV--------------RSPFEAPQYYLAE--------------------PWQFSMLAAYMFLLIML-GFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG-VAFTWVMALACAAPPLVGWSRY-IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186733 for 2776 contacts (-67.3/contact) +
2D Compatibility (PS) -35221 + (NN) -15664 + (LL) 1632
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -238586.0 ( -85.95 by residue)
QMean score : 0.236
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