Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MFNSLL-------VFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSE-KELVKGFFNCVSEKKPR---------LISFN-----GRTFDIPVLKYRAMVH--DVQAEYF-HKAGDKWNSY--------------NQRYSSNW-----------------HCDLLESLSD-----------FGAFARVKMNEVCAVFNLPGKI--GVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYL--RFMHHQGRITTRS---YNKNIEELLLECEK-KAHLRKFKEEWEITCGGRFCVE-FK----- |
4RNZ Chain:A ((1-369)) | MERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKK-GEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKM-AMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVK-----KGQIIGRVGSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74302 for 1693 contacts (-43.9/contact) +
2D Compatibility (PS) -28286 + (NN) -2654 + (LL) 224
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -119368.0 ( -70.51 by residue)
QMean score : 0.304
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