Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEKKLKAAVVLSGCGHLDGAEVREVVLSLLVLDQQEVEVKCFAPDI---NITQVVNHKTTEAVKEKRNVLVEAARVARSEICDLKEAKAEDFDMLVVPGGYGVAKNLSDLAEDKEVVTVIPEFERLVSEFFATKKPIGAICISPA-IIVS--ILSSKTSKGESKIKVTIGDDREKLIEKLGGEHIKCDTGLSIEDEEH--NVFSCSAYMR---RDESTYSVYQGIKHMIDSMVKKTNKRI |
2AB0 Chain:A ((2-185)) | ----SASALVCL-----APGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITC-----------SRGVKL-------LADAPLVEVADGEYDVIVLPGGIKGAECFR----------DSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPI--------GNMTGFPTLKDKIPA--EQWLD----KRVV-WDARVKLLTSQGPGTAIDFGLKIIDLLVG-REKAHEVASQLVMAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107537 for 1551 contacts (-69.3/contact) +
2D Compatibility (PS) -18447 + (NN) -851 + (LL) 2780
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -130405.0 ( -84.08 by residue)
QMean score : 0.381
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