Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANT---LVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLK--------------------DGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLP-VTEPEGSMVVDIGGGTTEVAIISL-GGIVYSRSAR------VGGDIMDEAIRSYIRENHKLLIG-------------ETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGM--PKEMLLS-----EYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISE---TTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 1DKG Chain:D ((3-383)) | KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD-----GETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKG-QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDK-TGNRTIAVYDLGGGTFDISIIEIDEKTFEVLA--TNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS--------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN---RSIELLKVALQDAG--LSVSDID-DVILVGGQTRMPMVQKKVAEFFG---KEPRKDVNPDEAVAIGAAVQGGVLT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141450 for 2627 contacts (-53.8/contact) +
2D Compatibility (PS) -34918 + (NN) -10358 + (LL) 2040
1D Compatibility (HY) 0 + (ID) 4050
Total energy: -188736.0 ( -71.84 by residue)
QMean score : 0.443
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