Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGACSGNPGTGGWAAIILFQDYRKDVYGREENTTSNKMELTAVINGLKALKFSCNINLYTDSLYVKSGITEWVSKWKVNGWKTSSKRSVKNIELWKELDNIASQHKINWKWVKAHNGDKHNEEANNLARKAIIDA
1JL1 Chain:A ((9-143))
TAGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHAEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERADELARAAAMNP
General information:
TITO was launched using:
RESULT:
Template:
1JL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31233 for 1024 contacts (-30.5/contact) +
2D Compatibility (PS) -14173 + (NN) -4295 + (LL) 0
1D Compatibility (HY) -6800 + (ID) 3100
Total energy: -59601.0 ( -58.20 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1JL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JL1-query.scw
PDB file :
Tito_Scwrl_1JL1.pdb
: