Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAVVKELAHPLFSAAGIDDNWIRVFIINDNSINAFVINNNSIFIHLGLLQYSTEPYALLSILAHEIAHISAGHISQMSSAVGYFQSIAIVSYMVGLISTIIINPQIASAILLSGMTLSSRLFFNYSQEQESVADSYALKYLDESGYDNLGMKEVFDYFRGIEHENAEGYFRTHPLSSKRIFAVQNYKVKNEVKPILVDKLLRFKRMVAKLDSFFSPIHVLSNKYED--NSEYVSAVIYYRQGKIKKAIAKVNSLIQESSNDPYLYELKAEMLYKTGNLNEAVKMYEESLKYLSEKNSYLVKLALSHALLLYGDIKKAIFHLEQIVSVEPNNAFVWKHLGIAYKCDANIAM-----------------HYFALTKKACIEGNLKQFVKYAELAVRNLPKDSPYLLQIEDMKRFNE |
| 1W3B Chain:A ((75-274)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN--FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55995 for 1356 contacts (-41.3/contact) +
2D Compatibility (PS) -19943 + (NN) -18105 + (LL) 15732
1D Compatibility (HY) 0 + (ID) 1500
Total energy: -79811.0 ( -58.86 by residue)
QMean score : 0.427
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