Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDL---TRVANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQARQTLNL-------------------------------------------S--HK---QALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIK-----TIKIDHLKRSFAEGYTVAIIAGFQGIYD--DRITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFK-EVEGTAVLHENDVLERHTITGITYSTNEALITFTNFAN------TLRTLKDMAGANIKIDMIHGS----SIVISEFDIDLMKE-------LLNKNE--DYV-INNNAAKISIIGIGV-----MSVMYHTLKFFSEKKIEILAIT--ASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 2CDQ Chain:A ((25-486)) | ----------------KGITCVMKFGGSSVASAERMKEVADLILTFPE--ESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDP-AVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRDM-TKSILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLKGRAIISLIGNVQHSSLILERAFHVL---YTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFESGDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244844 for 3101 contacts (-79.0/contact) +
2D Compatibility (PS) -40863 + (NN) -15580 + (LL) 1872
1D Compatibility (HY) -27600 + (ID) 4900
Total energy: -331915.0 ( -107.03 by residue)
QMean score : 0.444
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