Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKEIRNLKIASVLRRAISKVLMEGKVFNKNVVISDVKLSGDLKKADVYIVLSSLSKKKYNINTVVDEINQSAWLIRKSILSYVDLRFIPKLVFKADLAFDNFVNISKILSNYT
4Q7H Chain:D ((254-316))
--KEVGNLYDMFHTRNSLHRRAYQHKVGN----IIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQ
General information:
TITO was launched using:
RESULT:
Template:
4Q7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1125 for 279 contacts (-4.0/contact) +
2D Compatibility (PS) -6375 + (NN) -1163 + (LL) 676
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -10637.0 ( -38.13 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_4Q7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q7H-query.scw
PDB file :
Tito_Scwrl_4Q7H.pdb
: