Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKSLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFPIGANVIISGKLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSF-QLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIEN--NMQAALMAPTTILAEQHYNWIEEALSYTDIKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQAN-----VTFKNLGLAVIDEQQRFGVIQR-NCLV----GKGENADILFVTATPIPRTLQQAIY--GDVECSILREKPKSRLPIKTVAMNIKKLVEVIEKLKSAIN-RGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFFN-KVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 1HV8 Chain:A ((17-346)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILNAIRNKGFEKPTDIQMKVIPLFLNDE-----YNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQ-----IKALKNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSF--IKAKI--NANIEQSYVEVN-ENERFEALCRLLKNKEFYGLVFCKTK--------RDTKELASMLRD--IGFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVMSRGIDVNDLNCVINYHLPQ-NPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMKLKIKKLK------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182957 for 2553 contacts (-71.7/contact) +
2D Compatibility (PS) -34491 + (NN) -12665 + (LL) 24420
1D Compatibility (HY) -10400 + (ID) 3650
Total energy: -219743.0 ( -86.07 by residue)
QMean score : 0.395
|
|
|