Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDG---KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTR-------AREVGREK----FIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTIS--KETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVC--ESSLNTITFSTEEN---EQIDIATTRPELFLACVAVFCHPEDARY--------------------------------------AHLIGKTSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIY----------WQQKHNLPMKI-IIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVI-------KEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTL--DQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPV---WYSRRKGE-EGKVILAEVEDLPVDPLKDLPKG-YSKEEVVPDQDVMDTWATSAITPQLS------ALAVNSEF-SLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHA-NSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTAN-SRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSETMDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQLYSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLVRKIKADNNVSVKHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1WKB Chain:A ((4-810)) | -----LNFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENGEVIYLPAATLRPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLSFQDREIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIV-------FPAVE---------------EVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQEVKEAIAKEMLEKGIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFIDYGNPEWKEKARKALERMKILPETRRAQFEAIIDW-LDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRH---INKLRQEGKLDPEK--LTPEFFDYIFLEEFSEDKEKELEKKTG-IPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGT-LEGQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYEVK-----GNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDL-RWYLRRTEGRDD---------EAKRYVLRTLADVWVRLMAPFTPHICEELWEKLG----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261635 for 5688 contacts (-46.0/contact) +
2D Compatibility (PS) -72924 + (NN) -11861 + (LL) 10372
1D Compatibility (HY) -23600 + (ID) 7900
Total energy: -367548.0 ( -64.62 by residue)
QMean score : 0.326
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