Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEA-------PAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERY-RNIDVLLIDDIQFIQNKVQ---TQEEFFYTFNEL---HQNNKQIVISSDRPPKEIAQLEDRLRS--RFEWGLIVDITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQS-NIRELEGALTRLLAYSQLLG-KPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV |
| 1IY2 Chain:A ((33-276)) | -------------------------------------------------------------------------------------------------------------------EAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEAR-----VPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRK--NDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPD---ILDPALLRPGRFDR--QIAIDAPDVKGREQILRIHARGKPL-AEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEA----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83515 for 1746 contacts (-47.8/contact) +
2D Compatibility (PS) -23354 + (NN) -10289 + (LL) 17244
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -108914.0 ( -62.38 by residue)
QMean score : 0.541
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