Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFITFEGPEGSGKTTVINEVYHRLVKDY---DVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEKI
3LD9 Chain:B ((21-202))-SMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLNDLVID-VYPDITFIIDV----------------------DMEFYYRVRDGFYDIAKKNPHR----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64232 for 1178 contacts (-54.5/contact) +
2D Compatibility (PS) -17179 + (NN) -10209 + (LL) 3800
1D Compatibility (HY) -15200 + (ID) 3200
Total energy: -106220.0 ( -90.17 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3LD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LD9-query.scw
PDB file : Tito_Scwrl_3LD9.pdb: